5VTA
Co-Crystal Structure of DPPIV with a Chemibody Inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 120.325, 123.229, 129.018 |
Unit cell angles | 62.34, 77.21, 75.91 |
Refinement procedure
Resolution | 30.000 - 2.800 |
R-factor | 0.2522 |
Rwork | 0.250 |
R-free | 0.29980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.573 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (0.5.27) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.960 | 29.960 | 2.850 |
High resolution limit [Å] | 2.800 | 15.340 | 2.800 |
Rmerge | 0.133 | 0.086 | 0.794 |
Rmeas | 0.164 | 0.105 | 1.003 |
Rpim | 0.094 | 0.058 | 0.603 |
Total number of observations | 371086 | 2587 | 12038 |
Number of reflections | 138383 | ||
<I/σ(I)> | 5.4 | 12.3 | 1 |
Completeness [%] | 89.0 | 85.1 | 72.7 |
Redundancy | 2.7 | 3.2 | 2.2 |
CC(1/2) | 0.977 | 0.983 | 0.522 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 22% PEG 1000, sodium citrate tribasic dihydrate pH 5.5 |