5VQP
Crystal structure of human pro-TGF-beta1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-B |
| Synchrotron site | APS |
| Beamline | 23-ID-B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-07-14 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.03318 |
| Spacegroup name | P 6 2 2 |
| Unit cell lengths | 104.390, 104.390, 141.900 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 29.477 - 2.900 |
| R-factor | 0.2541 |
| Rwork | 0.252 |
| R-free | 0.29290 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3rjr |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.641 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.980 |
| High resolution limit [Å] | 2.900 | 2.900 |
| Rmerge | 0.170 | 6.000 |
| Number of reflections | 10672 | 753 |
| <I/σ(I)> | 12.32 | 0.48 |
| Completeness [%] | 99.7 | 100 |
| Redundancy | 10.5 | |
| CC(1/2) | 0.999 | 0.150 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 289 | 100 mM MES pH6.3, 1.68 M Ammonium Sulfate, 11% Dioxane |






