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5VLO

The structure of human CamKII with bound inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-25
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths54.473, 67.546, 85.450
Unit cell angles90.00, 94.11, 90.00
Refinement procedure
Resolution47.380 - 2.050
R-factor0.1837
Rwork0.183
R-free0.22610
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.518
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareEPMR
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.170
High resolution limit [Å]2.0502.050
Number of reflections389595733
<I/σ(I)>12.71.63
Completeness [%]98.591
Redundancy1312.7
CC(1/2)0.9980.742
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293CamKII S3-K301, in 20mM imidazole pH 8.5, 0.3M sodium chloride, 5mM TCEP, was concentrated to 36 mg/ml and flash frozen in liquid nitrogen for long term storage at -80 C in 10 uL aliquots. The protein was thawed and diluted down to 12 mg/mL in the same buffer just prior to crystallization experiments. Sitting drop vapor diffusion droplets were assembled with 250 nL of 12 mg/mL CamKII, 0.6 mM inhibitor and 250 nL of reservoir solution 24% peg 3350, 0.2 M ammonium tartrate, 0.1 M arginine. Flat crystal plates (typically 0.03 mm x 0.2 mm x 0.4 mm in size) grew in 4-7 days at 20 C. A crystal seed suspension was prepared with ten crushed crystals combined into 100 uL of reservoir solution and stored at -80 C. A thirty fold seed dilution was prepared in the same solution for addition to protein droplets in a 1 to 1 volume ratio to enhance crystallization of difficult to crystallize inhibitors.

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