5VDW
Human cyclic GMP-AMP synthase (cGAS) in complex with Compound F1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 173 |
Detector technology | PIXEL |
Collection date | 2016-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 217.360, 47.998, 86.861 |
Unit cell angles | 90.00, 105.29, 90.00 |
Refinement procedure
Resolution | 52.417 - 2.711 |
R-factor | 0.2239 |
Rwork | 0.222 |
R-free | 0.25710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o67 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.714 |
Data reduction software | Aimless |
Data scaling software | Aimless (0.3.11) |
Phasing software | REFMAC |
Refinement software | PHENIX (dev_1999) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.417 | 75.940 | 2.860 |
High resolution limit [Å] | 2.710 | 8.570 | 2.710 |
Rmerge | 0.151 | 0.034 | 0.736 |
Rmeas | 0.181 | 0.041 | 0.873 |
Rpim | 0.099 | 0.022 | 0.467 |
Number of reflections | 23537 | ||
<I/σ(I)> | 10.3 | ||
Completeness [%] | 98.3 | 95.4 | 99 |
Redundancy | 3.2 | 3.1 | 3.4 |
CC(1/2) | 0.980 | 0.997 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 18-20% PEG 3350, 0.2 M ammonium citrate pH 7 |