Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VBQ

CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRDT IN COMPLEX WITH BI2536

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-02-17
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths65.590, 31.000, 69.470
Unit cell angles90.00, 96.90, 90.00
Refinement procedure
Resolution34.484 - 1.650
Rwork0.143
R-free0.17180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4kcx
RMSD bond length0.010
RMSD bond angle1.397
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.48434.4841.690
High resolution limit [Å]1.6507.3801.650
Rmerge0.0520.0350.395
Rmeas0.0610.0420.464
Number of reflections336994142482
<I/σ(I)>17.2332.524.95
Completeness [%]99.196.199.4
Redundancy3.6623.0873.658
CC(1/2)0.9980.9960.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52918 MG/ML BRDT, 25MM HEPES PH 7.5, 75MM SODIUM CHLORIDE, 0.5MM DTT, 50MM MES PH 6.5, 0.1M AMMONIUM, SULFATE, 15% PEG MME 5,000, 10% DMSO, 1 MM BI2536

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon