Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VBA

Structure of EspG1 chaperone from the type VII (ESX-1) secretion system determined with the assistance of N-terminal T4 lysozyme fusion

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-11-05
DetectorRAYONIX MX300-HS
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths64.140, 81.690, 160.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution59.540 - 2.270
R-factor0.216
Rwork0.214
R-free0.25100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB entries 4GBR & 4L4W
RMSD bond length0.004
RMSD bond angle0.657
Data reduction softwareXDS (November 3, 2014)
Data scaling softwareXSCALE (November 3, 2014 BUILT=20141118)
Phasing softwarePHASER (2.5.7)
Refinement softwarePHENIX (DEV_2722)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]59.53659.5362.330
High resolution limit [Å]2.27010.1502.270
Rmerge0.0970.0481.110
Rmeas0.0541.206
Number of reflections395815052874
<I/σ(I)>11.0726.261.74
Completeness [%]99.897.1100
Redundancy6.3415.2796.541
CC(1/2)0.9960.583
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP92940.1 M Bicine, pH 9.0, 1.0 M lithium chloride, 10% PEG6000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon