5UD5
Crystal structure of the tRNA binding domain of Pyrrolysyl-tRNA synthetase bound to tRNA(Pyl)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-08-17 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.979200 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 72.280, 72.280, 238.970 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.218 - 2.347 |
| R-factor | 0.2191 |
| Rwork | 0.216 |
| R-free | 0.24230 |
| Structure solution method | SAD |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.835 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 49.220 |
| High resolution limit [Å] | 2.347 |
| Number of reflections | 31207 |
| <I/σ(I)> | 22.57 |
| Completeness [%] | 99.7 |
| Redundancy | 9.79 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 292 | HEPES, magnesium chloride, PEG3350 |






