5UB5
human POGLUT1 in complex with human Notch1 EGF12 S458T mutant and UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER TURBO X-RAY SOURCE |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-01 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.951, 74.072, 83.583 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.896 - 2.089 |
R-factor | 0.1547 |
Rwork | 0.153 |
R-free | 0.19310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5l0r |
RMSD bond length | 0.012 |
RMSD bond angle | 1.235 |
Data reduction software | SAINT |
Data scaling software | SAINT |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.900 | 2.164 |
High resolution limit [Å] | 2.089 | 2.089 |
Rmerge | 0.091 | 0.549 |
Number of reflections | 26486 | 2401 |
<I/σ(I)> | 18.74 | 3.16 |
Completeness [%] | 99.0 | 91.49 |
Redundancy | 11 | 5.3 |
CC(1/2) | 0.998 | 0.826 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 20% (v/v) PEG5000 MME, 50 mM MES pH 6.5, 2mM CaCl2, 250mM NaCl, 5% (v/v) 2-methyl-2,4-pentanediol |