5TVN
Crystal structure of the LSD-bound 5-HT2B receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-19 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.033 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 59.195, 119.177, 170.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.164 - 2.900 |
R-factor | 0.2125 |
Rwork | 0.210 |
R-free | 0.26280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ib4 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.848 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 3.000 |
High resolution limit [Å] | 2.900 | 6.230 | 2.900 |
Rmerge | 0.149 | 0.077 | 0.783 |
Rmeas | 0.174 | ||
Rpim | 0.087 | ||
Total number of observations | 42654 | ||
Number of reflections | 12422 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 90.4 | 83.6 | 92.2 |
Redundancy | 3.4 | 3.4 | 3.4 |
CC(1/2) | 0.990 | 0.563 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 100 mM Tris/HCl pH 7.5-8.0, 90-130 mM potassium phosphate monobasic, 28-30% PEG400 |