5TTO
X-ray crystal structure of PPARgamma in complex with SR1643
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-11-22 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 93.110, 62.240, 118.880 |
| Unit cell angles | 90.00, 102.20, 90.00 |
Refinement procedure
| Resolution | 45.504 - 2.246 |
| R-factor | 0.2065 |
| Rwork | 0.204 |
| R-free | 0.25550 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3fur |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.662 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless (0.5.25) |
| Phasing software | PHASER (2.6.1) |
| Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 58.100 | 58.100 | 2.320 |
| High resolution limit [Å] | 2.246 | 8.980 | 2.250 |
| Rmerge | 0.053 | 0.068 | 0.205 |
| Number of reflections | 31321 | ||
| <I/σ(I)> | 15.3 | ||
| Completeness [%] | 98.0 | 26.9 | 99.7 |
| Redundancy | 4.7 | 3.2 | 4.6 |
| CC(1/2) | 0.998 | 0.986 | 0.973 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289 | 2M ammonium sulfate |






