5TFO
CRYSTAL STRUCTURE OF THE ZIKA VIRUS NS2B-NS3 PROTEASE with a deletion V76-L86 in NS2b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 55.198, 55.198, 250.772 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.567 - 2.510 |
R-factor | 0.2193 |
Rwork | 0.218 |
R-free | 0.25020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ijo |
RMSD bond length | 0.003 |
RMSD bond angle | 0.493 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.030 | 2.610 |
High resolution limit [Å] | 2.510 | 2.510 |
Rmerge | 0.074 | 0.714 |
Number of reflections | 13989 | |
<I/σ(I)> | 13.2 | 1.5 |
Completeness [%] | 98.1 | 84.2 |
Redundancy | 6.3 | 4.7 |
CC(1/2) | 0.921 | 0.827 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.6 mM protein, in 100 mM NaCl, 1.0 mM TCEP, 20 mM Tris-Cl buffer (pH 8.0) was mixed with the well solution (25% PEG3330, 200 mM NaCl and 100 mM BisTris pH 6.5) |