5T1J
Crystal Structure of the Tbox DNA binding domain of the transcription factor T-bet
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-03-08 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.98 |
Spacegroup name | P 61 |
Unit cell lengths | 70.450, 70.450, 438.389 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.702 - 2.947 |
R-factor | 0.2674 |
Rwork | 0.266 |
R-free | 0.29440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.741 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.990 |
High resolution limit [Å] | 2.940 | 7.970 | 2.940 |
Rmerge | 0.124 | 0.080 | 0.848 |
Number of reflections | 22707 | ||
<I/σ(I)> | 15.7 | ||
Completeness [%] | 87.3 | 85.1 | 31.4 |
Redundancy | 8.7 | 8.8 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.1 | 293 | sodium citrate, sodium formate, ethylene glycol |