5SXH
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-10-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.390, 50.990, 77.410 |
| Unit cell angles | 90.00, 101.96, 90.00 |
Refinement procedure
| Resolution | 41.570 - 1.780 |
| R-factor | 0.1869 |
| Rwork | 0.185 |
| R-free | 0.21570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5cqk |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.762 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | phenix.refine (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 75.550 | 1.830 |
| High resolution limit [Å] | 1.780 | 1.780 |
| Rmerge | 0.102 | 1.100 |
| Number of reflections | 32228 | |
| <I/σ(I)> | 8.8 | 1 |
| Completeness [%] | 98.9 | 99.1 |
| Redundancy | 3.8 | 3.8 |
| CC(1/2) | 0.376 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 283 | PEG3350 |






