5SI0
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH n4c(n1c(nc(n1)CCc2nn(c(n2)N3CCCC3)C)cc4C)CCc5nn(c(n5)N6CCCC6)C, micromolar IC50=0.047938
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-04-30 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999980 |
Spacegroup name | H 3 |
Unit cell lengths | 135.473, 135.473, 234.913 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.610 - 2.270 |
R-factor | 0.1822 |
Rwork | 0.180 |
R-free | 0.23190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.493 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.570 | 43.610 | 2.330 |
High resolution limit [Å] | 2.270 | 10.150 | 2.270 |
Rmerge | 0.071 | 0.016 | 1.409 |
Rmeas | 0.079 | 0.018 | 1.566 |
Total number of observations | 386441 | ||
Number of reflections | 74263 | 830 | 5525 |
<I/σ(I)> | 15.75 | 71.66 | 1.19 |
Completeness [%] | 99.9 | 98.9 | 99.9 |
Redundancy | 5.204 | 5.052 | 5.278 |
CC(1/2) | 0.999 | 1.000 | 0.450 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |