5SB3
Tubulin-todalam-4-complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-23 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.650, 157.714, 180.188 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.460 - 2.200 |
R-factor | 0.1967 |
Rwork | 0.195 |
R-free | 0.22490 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lxt |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.19.1_4122) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.460 | 49.460 | 2.260 |
High resolution limit [Å] | 2.200 | 9.850 | 2.200 |
Rmerge | 0.172 | 0.037 | 2.879 |
Rmeas | 0.179 | 0.039 | 2.988 |
Total number of observations | 2060719 | ||
Number of reflections | 150862 | 1857 | 10972 |
<I/σ(I)> | 13.04 | 60.94 | 0.93 |
Completeness [%] | 99.9 | 98.9 | 99 |
Redundancy | 13.66 | 12.512 | 13.803 |
CC(1/2) | 0.999 | 0.999 | 0.336 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine |