5PAM
Crystal Structure of Factor VIIa in complex with 2-[(1-aminoisoquinolin-6-yl)amino]-2-(5-ethoxy-2-fluorophenyl)-1-(2-phenylpyrrolidin-1-yl)ethanone
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2007-10-25 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 0.800100 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 94.740, 94.740, 116.540 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.630 - 1.600 |
| R-factor | 0.1709 |
| Rwork | 0.170 |
| R-free | 0.19000 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | inhouse model |
| RMSD bond length | 0.020 |
| RMSD bond angle | 1.917 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.630 | 49.630 | 1.640 |
| High resolution limit [Å] | 1.600 | 7.160 | 1.600 |
| Rmerge | 0.078 | 0.032 | 0.665 |
| Rmeas | 0.084 | 0.035 | 0.717 |
| Total number of observations | 448279 | ||
| Number of reflections | 68815 | 839 | 5116 |
| <I/σ(I)> | 14.78 | 40.2 | 2.86 |
| Completeness [%] | 97.8 | 91.4 | 99.9 |
| Redundancy | 6.51 | ||
| CC(1/2) | 0.998 | 0.998 | 0.729 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 16 mg/ml protein in 20mM Tris/HCl pH 8.4, 5 mM benzamidine, 0.1 M NaCl, 50 mM CaCl2 mixed 1+1 with 32-35% AMMONIUM SULPHATE, 2% PEG 4000, 0.1 M Bicine-NaOH pH 8.5, 15% glycerol |






