5OVF
Ras guanine nucleotide exchange factor SOS1 (Rem-cdc25) in complex with small molecule inhibitor compound 17
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.895, 85.161, 176.537 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.410 - 2.010 |
R-factor | 0.24829 |
Rwork | 0.246 |
R-free | 0.28501 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | INHOUSE STRUCTURE |
RMSD bond length | 0.007 |
RMSD bond angle | 1.042 |
Data reduction software | XDS (Version March 1, 2015) |
Data scaling software | XDS (Version March 1, 2015) |
Phasing software | MOLREP (11.0.02) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.410 | 2.130 |
High resolution limit [Å] | 2.010 | 2.010 |
Number of reflections | 40982 | 6446 |
<I/σ(I)> | 10.83 | 1.87 |
Completeness [%] | 99.3 | 98.3 |
Redundancy | 4.36 | 4.33 |
CC(1/2) | 0.998 | 0.665 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | Protein concentration 30.7 mg/ml. Protein buffer 25 Millimolar TRIS-HCL PH 7.5, 50 millimolar NaCl, 1 millimolar DTT. Reservoir 27% (v/v) ethylenglycol. Protein incubated with 2 MILLIMOLAR LIGAND prior to crystallization. |