Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OVF

Ras guanine nucleotide exchange factor SOS1 (Rem-cdc25) in complex with small molecule inhibitor compound 17

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-25
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.91841
Spacegroup nameP 21 21 21
Unit cell lengths39.895, 85.161, 176.537
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.410 - 2.010
R-factor0.24829
Rwork0.246
R-free0.28501
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)INHOUSE STRUCTURE
RMSD bond length0.007
RMSD bond angle1.042
Data reduction softwareXDS (Version March 1, 2015)
Data scaling softwareXDS (Version March 1, 2015)
Phasing softwareMOLREP (11.0.02)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4102.130
High resolution limit [Å]2.0102.010
Number of reflections409826446
<I/σ(I)>10.831.87
Completeness [%]99.398.3
Redundancy4.364.33
CC(1/2)0.9980.665
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5293Protein concentration 30.7 mg/ml. Protein buffer 25 Millimolar TRIS-HCL PH 7.5, 50 millimolar NaCl, 1 millimolar DTT. Reservoir 27% (v/v) ethylenglycol. Protein incubated with 2 MILLIMOLAR LIGAND prior to crystallization.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon