5O9H
Crystal structure of thermostabilised human C5a anaphylatoxin chemotactic receptor 1 (C5aR) in complex with NDT9513727
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96861 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 83.093, 51.096, 118.936 |
Unit cell angles | 90.00, 106.73, 90.00 |
Refinement procedure
Resolution | 19.894 - 2.700 |
R-factor | 0.2095 |
Rwork | 0.208 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dkl |
RMSD bond length | 0.004 |
RMSD bond angle | 1.035 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.600 | 2.830 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.190 | 0.923 |
Number of reflections | 26541 | |
<I/σ(I)> | 7 | 1.7 |
Completeness [%] | 99.3 | 99.6 |
Redundancy | 5 | 5.1 |
CC(1/2) | 0.987 | 0.631 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.5 | 295.65 | 100mM tri-sodium citrate pH 5.5, 200mM Na/K tartrate, 35-45% (v/v) polyethylene glycol 400 |