5NTT
Crystal structure of human Mps1 (TTK) C604Y mutant in complex with NMS-P715
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.07227 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 70.672, 112.010, 116.126 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.650 - 2.750 |
R-factor | 0.2006 |
Rwork | 0.199 |
R-free | 0.22980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mrb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.235 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (refmac_5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.650 | 41.650 | 2.900 |
High resolution limit [Å] | 2.750 | 8.700 | 2.750 |
Rmerge | 0.150 | 0.033 | 1.437 |
Rmeas | 0.165 | 0.037 | 1.580 |
Rpim | 0.067 | 0.016 | 0.651 |
Total number of observations | 72378 | ||
Number of reflections | 12326 | ||
<I/σ(I)> | 9.6 | ||
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 5.9 | 5.2 | 5.8 |
CC(1/2) | 0.996 | 0.998 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 291 | 10.5% (w/v) PEG 350 MME, 10 mM MgCl2, and 100 mM Tris/HCl |