5N5D
Crystal Structure of the O-Methyltransferase TomG from Streptomyces achromogenes involved in Tomaymycin synthesis in complex with SAM
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, DESY BEAMLINE P11 |
| Synchrotron site | PETRA III, DESY |
| Beamline | P11 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-02 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.033 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 67.597, 75.877, 86.784 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.470 - 1.550 |
| R-factor | 0.1486 |
| Rwork | 0.148 |
| R-free | 0.16610 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3cbg |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.715 |
| Data reduction software | XDS (May 1, 2016) |
| Data scaling software | XDS (May 1, 2016) |
| Phasing software | PHASER (2.7.16) |
| Refinement software | PHENIX ((dev_2608: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.470 | 1.580 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Rmeas | 0.079 | 1.691 |
| Number of reflections | 65091 | |
| <I/σ(I)> | 22.9 | 1.7 |
| Completeness [%] | 99.6 | 98.7 |
| Redundancy | 13.2 | 13 |
| CC(1/2) | 1.000 | 0.783 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 295 | 2.1 M NH4(SO4)2, 0.1 M Li2SO4, 0.1 M Hepes pH 7.3 |






