5MKI
Crystal structure of SmAP (LSm) protein from Methanococcus vannielii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.918400 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.671, 114.221, 71.993 |
Unit cell angles | 90.00, 113.70, 90.00 |
Refinement procedure
Resolution | 43.164 - 2.048 |
R-factor | 0.1939 |
Rwork | 0.191 |
R-free | 0.25660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i4k |
RMSD bond length | 0.007 |
RMSD bond angle | 0.880 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.120 |
High resolution limit [Å] | 2.048 | 2.048 |
Rmerge | 0.083 | 0.800 |
Number of reflections | 63608 | |
<I/σ(I)> | 11.77 | 1.5 |
Completeness [%] | 97.9 | 95.38 |
Redundancy | 3.8 | 3.7 |
CC(1/2) | 0.998 | 0.638 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297 | Protein 10 mg/ml, 30% PEG400, 0,1M HEPES, pH 7.5, 0,2 M CaCl2 |