5LW1
Crystal structure of DARPin-DARPin rigid fusion, variant DD_232_11_D12 in complex JNK1a1 and JIP1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 219.990, 141.760, 119.850 |
Unit cell angles | 90.00, 97.83, 90.00 |
Refinement procedure
Resolution | 49.383 - 3.200 |
R-factor | 0.1771 |
Rwork | 0.175 |
R-free | 0.21240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1SVX chain A and 1UKH |
RMSD bond length | 0.002 |
RMSD bond angle | 0.494 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.383 | 3.314 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.135 | 1.842 |
Rpim | 0.054 | 0.735 |
Number of reflections | 58948 | 5875 |
<I/σ(I)> | 11.27 | 1.13 |
Completeness [%] | 97.9 | 98.46 |
Redundancy | 7 | 7.2 |
CC(1/2) | 0.998 | 0.420 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | Lithium Sulfate 1.8 M Tris 0.1 M Additives (0.002% w/v) Adenosine, Pepstatin A Epinephrine Sodium phenyl phosphate dibasic dehydrate Inosine 5-triphosphate trisodium salt pH 8.5 |