5LRR
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with glutathione
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.073 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 116.265, 184.227, 100.457 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.538 - 2.171 |
R-factor | 0.2092 |
Rwork | 0.207 |
R-free | 0.24060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bgc |
RMSD bond length | 0.003 |
RMSD bond angle | 0.508 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.538 | 2.250 |
High resolution limit [Å] | 2.170 | 2.170 |
Rmerge | 0.123 | 1.840 |
Number of reflections | 114028 | |
<I/σ(I)> | 13.2 | 1.5 |
Completeness [%] | 99.6 | 96.7 |
Redundancy | 13.4 | 13.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | Prior to the crystallization setup GSH and DTT were added to the protein solution to final concentrations of 5 mM and 1 mM, respectively. Droplets of 4 microL protein solution at 3.2 mg per ml were mixed with 2 microL reservoir solution consisting of 22% PEG 4000, 100 mM sodium citrate pH 5.5. Crystals used for data collection were obtained after 48 h. Prior to vitrification crystals were equilibrated for 24 h in a solution containing 30% PEG 4000, 100 mM sodium citrate pH 5.5 and 50 mM GSH. |