5LRR
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with glutathione
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003700 | molecular_function | DNA-binding transcription factor activity |
A | 0005829 | cellular_component | cytosol |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0003677 | molecular_function | DNA binding |
B | 0003700 | molecular_function | DNA-binding transcription factor activity |
B | 0005829 | cellular_component | cytosol |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0003677 | molecular_function | DNA binding |
C | 0003700 | molecular_function | DNA-binding transcription factor activity |
C | 0005829 | cellular_component | cytosol |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
D | 0003677 | molecular_function | DNA binding |
D | 0003700 | molecular_function | DNA-binding transcription factor activity |
D | 0005829 | cellular_component | cytosol |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
E | 0003677 | molecular_function | DNA binding |
E | 0003700 | molecular_function | DNA-binding transcription factor activity |
E | 0005829 | cellular_component | cytosol |
E | 0006355 | biological_process | regulation of DNA-templated transcription |
F | 0003677 | molecular_function | DNA binding |
F | 0003700 | molecular_function | DNA-binding transcription factor activity |
F | 0005829 | cellular_component | cytosol |
F | 0006355 | biological_process | regulation of DNA-templated transcription |
G | 0003677 | molecular_function | DNA binding |
G | 0003700 | molecular_function | DNA-binding transcription factor activity |
G | 0005829 | cellular_component | cytosol |
G | 0006355 | biological_process | regulation of DNA-templated transcription |
H | 0003677 | molecular_function | DNA binding |
H | 0003700 | molecular_function | DNA-binding transcription factor activity |
H | 0005829 | cellular_component | cytosol |
H | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | binding site for residue GSH A 301 |
Chain | Residue |
A | GLN61 |
A | ILE149 |
A | VAL153 |
A | TYR154 |
A | HOH416 |
A | HOH421 |
A | HOH449 |
A | HOH453 |
A | TYR62 |
A | TYR63 |
A | LYS64 |
A | GLY65 |
A | ALA66 |
A | PHE67 |
A | LYS122 |
A | TYR126 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue NA A 302 |
Chain | Residue |
A | PHE29 |
A | GLN35 |
A | GLU36 |
A | TYR37 |
A | SER71 |
A | HOH441 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue PO4 A 303 |
Chain | Residue |
A | HIS182 |
A | SER183 |
A | SER184 |
A | HOH434 |
site_id | AC4 |
Number of Residues | 16 |
Details | binding site for residue GSH B 301 |
Chain | Residue |
B | TYR62 |
B | TYR63 |
B | LYS64 |
B | GLY65 |
B | ALA66 |
B | PHE67 |
B | LYS122 |
B | TYR126 |
B | ILE149 |
B | VAL153 |
B | TYR154 |
B | HOH415 |
B | HOH418 |
B | HOH449 |
B | HOH454 |
B | HOH461 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue PO4 B 302 |
Chain | Residue |
B | GLN172 |
B | HIS182 |
B | SER183 |
B | HOH412 |
B | HOH420 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue PO4 B 303 |
Chain | Residue |
B | GLY138 |
B | LYS139 |
F | TRP32 |
site_id | AC7 |
Number of Residues | 16 |
Details | binding site for residue GSH C 301 |
Chain | Residue |
C | GLN61 |
C | TYR62 |
C | TYR63 |
C | LYS64 |
C | GLY65 |
C | ALA66 |
C | PHE67 |
C | LYS122 |
C | TYR126 |
C | ILE149 |
C | VAL153 |
C | TYR154 |
C | HOH420 |
C | HOH422 |
C | HOH432 |
C | HOH433 |
site_id | AC8 |
Number of Residues | 15 |
Details | binding site for residue GSH D 301 |
Chain | Residue |
D | GLN61 |
D | TYR62 |
D | TYR63 |
D | LYS64 |
D | GLY65 |
D | ALA66 |
D | PHE67 |
D | LYS122 |
D | TYR126 |
D | ILE149 |
D | TYR154 |
D | HOH403 |
D | HOH405 |
D | HOH411 |
D | HOH432 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue NA D 302 |
Chain | Residue |
D | PHE29 |
D | GLN35 |
D | SER71 |
site_id | AD1 |
Number of Residues | 7 |
Details | binding site for residue GSH E 301 |
Chain | Residue |
E | TYR63 |
E | LYS64 |
E | ALA66 |
E | PHE67 |
E | ILE149 |
E | CYS229 |
E | HOH455 |
site_id | AD2 |
Number of Residues | 6 |
Details | binding site for residue NA E 302 |
Chain | Residue |
E | ASN30 |
E | ASP33 |
E | GLU36 |
E | HOH407 |
E | HOH412 |
E | HOH419 |
site_id | AD3 |
Number of Residues | 11 |
Details | binding site for residue GSH F 301 |
Chain | Residue |
F | TYR63 |
F | LYS64 |
F | GLY65 |
F | ALA66 |
F | PHE67 |
F | LYS122 |
F | TYR126 |
F | ILE149 |
F | HOH433 |
F | GLN61 |
F | TYR62 |
site_id | AD4 |
Number of Residues | 5 |
Details | binding site for residue NA F 302 |
Chain | Residue |
F | PHE29 |
F | GLN35 |
F | TYR37 |
F | SER71 |
F | HOH407 |
site_id | AD5 |
Number of Residues | 8 |
Details | binding site for residue GSH G 301 |
Chain | Residue |
G | TYR63 |
G | LYS64 |
G | ALA66 |
G | TYR126 |
G | GLN146 |
G | ILE149 |
G | CYS229 |
G | HOH426 |
site_id | AD6 |
Number of Residues | 12 |
Details | binding site for residue GSH H 301 |
Chain | Residue |
H | GLN61 |
H | TYR62 |
H | TYR63 |
H | LYS64 |
H | GLY65 |
H | ALA66 |
H | PHE67 |
H | TYR126 |
H | GLN146 |
H | ILE149 |
H | HOH401 |
H | HOH403 |
site_id | AD7 |
Number of Residues | 6 |
Details | binding site for residue NA H 302 |
Chain | Residue |
C | ARG188 |
H | ASN30 |
H | GLN31 |
H | ASP33 |
H | HOH411 |
H | HOH421 |
Functional Information from PROSITE/UniProt
site_id | PS00042 |
Number of Residues | 25 |
Details | HTH_CRP_1 Crp-type HTH domain signature. LTMqeLGySSGiAhsSavSRiIskL |
Chain | Residue | Details |
A | LEU169-LEU193 |