5LPO
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4R,5R)-3,4,5-trimethoxytetrahydrofuran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918408 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 84.662, 64.819, 71.241 |
Unit cell angles | 90.00, 93.53, 90.00 |
Refinement procedure
Resolution | 42.440 - 1.420 |
R-factor | 0.1335 |
Rwork | 0.132 |
R-free | 0.16270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1p0d |
RMSD bond length | 0.005 |
RMSD bond angle | 0.826 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: 1492)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.440 | 1.500 |
High resolution limit [Å] | 1.420 | 1.420 |
Rmerge | 0.322 | |
Number of reflections | 71176 | |
<I/σ(I)> | 17.2 | 2.9 |
Completeness [%] | 97.8 | 90.1 |
Redundancy | 3 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 288 | 13% PEG 8000, 100mM MES, 1mM DTT, 10% DMSO |