5LGK
Crystal structure of the human IgE-Fc bound to its B cell receptor derCD23
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-04-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 80.520, 85.320, 88.230 |
Unit cell angles | 117.87, 90.32, 112.62 |
Refinement procedure
Resolution | 75.960 - 3.500 |
R-factor | 0.2665 |
Rwork | 0.266 |
R-free | 0.27840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ezm 2WQR and 4J6J |
RMSD bond length | 0.007 |
RMSD bond angle | 0.840 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (2.10.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.000 | 3.690 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.319 | 0.758 |
Number of reflections | 21032 | |
<I/σ(I)> | 2.1 | |
Completeness [%] | 89.3 | |
Redundancy | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 15% (w/v) PEG 8,000, 0.1 M sodium citrate, 0.05 M ammonium sulfate |