5KM6
Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant Ara-A nucleoside phosphoramidate substrate complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 40.163, 40.163, 144.239 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.089 - 1.600 |
R-factor | 0.1725 |
Rwork | 0.172 |
R-free | 0.19130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kpf |
RMSD bond length | 0.007 |
RMSD bond angle | 1.376 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 144.239 | 144.239 | 1.605 |
High resolution limit [Å] | 1.600 | 7.426 | 1.600 |
Rmerge | 0.062 | 0.035 | 0.336 |
Rmeas | 0.065 | ||
Rpim | 0.019 | ||
Total number of observations | 199943 | ||
Number of reflections | 16559 | ||
<I/σ(I)> | 25.9 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 12.1 | 8.9 | 12.7 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 100 mM MES, 32% PEG 8000 |