5JMX
Crystal Structure of BcII metallo-beta-lactamase in complex with DZ-305
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-14 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 53.250, 61.240, 69.050 |
Unit cell angles | 90.00, 93.09, 90.00 |
Refinement procedure
Resolution | 68.950 - 1.440 |
R-factor | 0.1478 |
Rwork | 0.146 |
R-free | 0.18580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tyt |
RMSD bond length | 0.010 |
RMSD bond angle | 1.104 |
Data reduction software | xia2 |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.950 | 1.480 |
High resolution limit [Å] | 1.440 | 1.440 |
Rmerge | 0.083 | 1.567 |
Number of reflections | 40059 | |
<I/σ(I)> | 10.1 | 1.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.6 | 6.4 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1MM TCEP, 5MM DZ-305, 50MM HEPES PH7.5, 100MM NACL, 0.1MM ZNCL2, 0.1M MAGNESIUM FORMATE, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K |