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5JMX

Crystal Structure of BcII metallo-beta-lactamase in complex with DZ-305

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 301
ChainResidue
AASP120
ACYS198
AHIS240
ADZ5304

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 302
ChainResidue
AHIS116
AHIS118
AHIS179
ADZ5304

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 303
ChainResidue
ALYS169
AGLN190
AHOH506
ALYS103

site_idAC4
Number of Residues11
Detailsbinding site for residue DZ5 A 304
ChainResidue
AHIS118
AASP120
AHIS179
ACYS198
AASN210
AASP213
AHIS240
AZN301
AZN302
AHOH437
AHOH448

site_idAC5
Number of Residues5
Detailsbinding site for residue GOL A 305
ChainResidue
ATHR59
AASN72
AGLY241
AGLU242
AVAL243

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL A 306
ChainResidue
AALA117
AASN148
ATHR180
AASP182
AASP213

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL A 307
ChainResidue
AGLU99
AGLU130
AARG131
AHOH493
AHOH496
AHOH527

Functional Information from PROSITE/UniProt
site_idPS00743
Number of Residues20
DetailsBETA_LACTAMASE_B_1 Beta-lactamases class B signature 1. IiTHaHADriGGiktlker.G
ChainResidueDetails
AILE113-GLY132

site_idPS00744
Number of Residues13
DetailsBETA_LACTAMASE_B_2 Beta-lactamases class B signature 2. PqynILvGgCLVK
ChainResidueDetails
APRO189-LYS201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:20677753, ECO:0000269|PubMed:24059435, ECO:0000269|PubMed:26482303, ECO:0000269|PubMed:7588620, ECO:0000269|PubMed:9761898
ChainResidueDetails
AHIS116
AHIS118
AHIS179

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:20677753, ECO:0000269|PubMed:24059435, ECO:0000269|PubMed:26482303
ChainResidueDetails
AASP120
ACYS198
AHIS240

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:26482303
ChainResidueDetails
ALYS201

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:26482303, ECO:0000269|PubMed:9761898
ChainResidueDetails
AASN210

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 16
ChainResidueDetails
AHIS116metal ligand
AHIS118metal ligand
AASP120hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS179metal ligand
AASN210electrostatic stabiliser, hydrogen bond donor

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PDB entries from 2024-10-30

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