5JBB
Crystal structure of factor IXa variant V16I K98T Y177T I213V in complex with EGR-chloromethylketone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-29 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8729 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.310, 66.610, 97.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.599 - 1.560 |
R-factor | 0.1598 |
Rwork | 0.158 |
R-free | 0.19010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wph |
RMSD bond length | 0.016 |
RMSD bond angle | 1.579 |
Data reduction software | iMOSFLM (7.11) |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP (11.2.08) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 21.600 | 1.616 |
High resolution limit [Å] | 1.560 | 1.560 |
Rmerge | 0.070 | 0.748 |
Number of reflections | 41579 | |
<I/σ(I)> | 12.4 | 2.1 |
Completeness [%] | 99.7 | 99.49 |
Redundancy | 6 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 6 mg/mL protein-inhibitor complex, 0.1M MES pH 6.5, 20% PEG6000 |