5JB9
Crystal structure of factor IXa K98T variant in complex with PPACK
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-07 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8729 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.270, 67.050, 97.150 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.919 - 1.300 |
R-factor | 0.1522 |
Rwork | 0.151 |
R-free | 0.17620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wph |
RMSD bond length | 0.017 |
RMSD bond angle | 1.518 |
Data reduction software | iMOSFLM (7.11) |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP (11.2.08) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 14.920 | 1.346 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.065 | 0.697 |
Number of reflections | 71402 | |
<I/σ(I)> | 9.51 | 1.81 |
Completeness [%] | 99.4 | 100 |
Redundancy | 4.5 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 6 mg/mL protein/inhibitor complex 0.1 M MES pH 6.5 18% PEG6000 |