5IG6
Ultra-high resolution crystal structure of second bromodomain of BRD2 in complex with inhibitor 6B3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-22 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.7293 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 32.000, 52.370, 71.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 0.910 |
R-factor | 0.1262 |
Rwork | 0.125 |
R-free | 0.14336 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2e3k |
RMSD bond length | 0.016 |
RMSD bond angle | 1.812 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.220 | 0.960 |
High resolution limit [Å] | 0.910 | 0.910 |
Rmerge | 0.054 | 1.627 |
Number of reflections | 86054 | |
<I/σ(I)> | 11.6 | 0.9 |
Completeness [%] | 99.4 | 100 |
Redundancy | 4.4 | 4.1 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 300 | 30% PEG MME 2000, 50mM Tris-HCl pH 7.5, 50mM NaCl, 20% glycerol |