5HEM
Crystal structure of the N-terminus D161Y bromodomain mutant of human BRD2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 68.730, 68.730, 113.364 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.670 - 1.650 |
R-factor | 0.16823 |
Rwork | 0.167 |
R-free | 0.19888 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4alh |
RMSD bond length | 0.017 |
RMSD bond angle | 1.663 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.670 | 1.680 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.108 | 0.330 |
Number of reflections | 33564 | |
<I/σ(I)> | 13.8 | 4.1 |
Completeness [%] | 99.7 | 95.5 |
Redundancy | 6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 15% PEG3350, 0.1M bis-tris propane pH 6.6, 10% ethylene glycol, 0.15M sodium acetate |