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5GQD

Crystal structure of covalent glycosyl-enzyme intermediate of xylanase mutant (T82A, N127S, and E128H) from Streptomyces olivaceoviridis E-86

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NW12A
Synchrotron sitePhoton Factory
BeamlineAR-NW12A
Temperature [K]173
Detector technologyCCD
Collection date2005-02-05
DetectorADSC QUANTUM 210r
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths78.186, 94.045, 140.078
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.090 - 1.800
R-factor0.175
Rwork0.175
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2d1z
RMSD bond length0.005
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.0630.286
Number of reflections94763
<I/σ(I)>32.66.1
Completeness [%]98.497
Redundancy7.36.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.729325% ammonium sulfate 2% Mcllvaine buffer

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