5GIO
Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-09-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9789 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 241.781, 241.781, 145.002 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.957 - 3.604 |
R-factor | 0.2579 |
Rwork | 0.256 |
R-free | 0.29800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pla |
RMSD bond length | 0.005 |
RMSD bond angle | 0.885 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.660 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmerge | 0.165 | |
Number of reflections | 49349 | |
<I/σ(I)> | 12.4 | |
Completeness [%] | 99.7 | |
Redundancy | 7.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 2.0M ammonium sulfate, 2%(v/v) PEG400, 10mM magnesium chloride, 0.1M HEPES |