5FH7
Crystal structure of the fifth bromodomain of human PB1 in complex with compound 18
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.980, 59.210, 138.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.530 - 1.470 |
R-factor | 0.18785 |
Rwork | 0.187 |
R-free | 0.20850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q0o |
RMSD bond length | 0.016 |
RMSD bond angle | 1.649 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.210 | 6.570 |
High resolution limit [Å] | 1.470 | 1.470 |
Rmerge | 0.052 | 0.565 |
Number of reflections | 56934 | |
<I/σ(I)> | 21.4 | 2.1 |
Completeness [%] | 95.2 | 68.3 |
Redundancy | 7.8 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277.15 | 0.1 M magnesium formate, 15% PEG 3350 |