5F5I
Crystal Structure of human JMJD2A complexed with KDOOA011340
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-08-07 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.92000 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 101.030, 149.580, 57.920 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 54.010 - 2.630 |
| R-factor | 0.2124 |
| Rwork | 0.211 |
| R-free | 0.24330 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2oq7 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.212 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.1.29) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 54.010 | 54.010 | 2.700 |
| High resolution limit [Å] | 2.630 | 11.760 | 2.630 |
| Rmerge | 0.105 | 0.028 | 0.907 |
| Rpim | 0.043 | 0.013 | 0.368 |
| Total number of observations | 176830 | 2108 | 13209 |
| Number of reflections | 26629 | ||
| <I/σ(I)> | 15.5 | 52.6 | 2.3 |
| Completeness [%] | 99.2 | 98.4 | 99.8 |
| Redundancy | 6.6 | 5.9 | 6.9 |
| CC(1/2) | 0.998 | 1.000 | 0.728 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.9 | 277 | 0.1M bis-tris pH 5.9 , 0.15M ammonium sulfate , 13% PEG3350 |






