Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EMC

Transcription factor GRDBD and smGRE complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyCCD
Collection date2013-06-08
DetectorADSC QUANTUM 270
Wavelength(s)0.980
Spacegroup nameP 21 21 21
Unit cell lengths38.942, 99.643, 112.229
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.256 - 2.300
R-factor0.2266
Rwork0.225
R-free0.26090
RMSD bond length0.006
RMSD bond angle0.892
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.25650.0002.500
High resolution limit [Å]2.30010.0002.300
Rmerge0.1280.0620.519
Rmeas0.1540.0760.630
Total number of observations57041
Number of reflections197802424301
<I/σ(I)>5.4511.442.05
Completeness [%]96.683.799.1
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP728950mM HEPES, 100mM KCl, 10mM MgCl2, 5% PEG 400

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon