5E5G
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with D-tryptophan bound in the tryptophan and phenylalanine binding sites
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.953700 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 205.002, 205.002, 66.542 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.250 - 1.950 |
R-factor | 0.1685 |
Rwork | 0.168 |
R-free | 0.18380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nv8 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.715 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.250 | 47.250 | 1.980 |
High resolution limit [Å] | 1.950 | 10.680 | 1.950 |
Rmerge | 0.150 | 0.028 | 1.489 |
Rpim | 0.047 | 0.009 | 0.533 |
Total number of observations | 1300419 | 7547 | 48204 |
Number of reflections | 116470 | ||
<I/σ(I)> | 14.1 | 53.3 | 1.5 |
Completeness [%] | 100.0 | 98.8 | 99.7 |
Redundancy | 11.2 | 9.8 | 8.5 |
CC(1/2) | 0.998 | 1.000 | 0.518 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M TRIS-HCL, PH 7.5, 1.5M AMMONIUM SULFATE, 12% V/V GLYCEROL. CRYSTALS WERE SOAKED IN THE SAME SOLUTION WITH AN ADDITIONAL 10% V/V GLYCEROL AND 10 MM D-TRYPTOPHAN |