5D9Y
Crystal structure of TET2-5fC complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-15 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 48.154, 87.958, 268.020 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.767 - 1.971 |
R-factor | 0.2074 |
Rwork | 0.205 |
R-free | 0.24820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nm6 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.159 |
Data reduction software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.040 |
High resolution limit [Å] | 1.970 | 4.240 | 1.970 |
Rmerge | 0.055 | 0.036 | 0.624 |
Rmeas | 0.060 | 0.039 | 0.695 |
Rpim | 0.024 | 0.016 | 0.299 |
Total number of observations | 242789 | ||
Number of reflections | 57919 | ||
<I/σ(I)> | 7.5 | ||
Completeness [%] | 98.9 | 99.8 | 93.2 |
Redundancy | 6 | 6.3 | 4.7 |
CC(1/2) | 0.998 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 277 | 21% PEGMME2000, 0.1M MES |