5CQA
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with N-methyl-2,3-dihydrothieno[3,4-b][1,4]dioxine-5-carboxamide (SGC - Diamond I04-1 fragment screening)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.92001 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 83.160, 96.940, 58.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.200 - 2.130 |
R-factor | 0.1776 |
Rwork | 0.175 |
R-free | 0.22220 |
Structure solution method | MOLECULAR REPLACEMENT |
Data scaling software | Aimless (0.2.17) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.220 | 37.220 | 2.190 |
High resolution limit [Å] | 2.130 | 9.530 | 2.130 |
Rmerge | 0.156 | 0.034 | 0.792 |
Rpim | 0.067 | 0.015 | 0.344 |
Total number of observations | 83872 | 1019 | 5985 |
Number of reflections | 13238 | ||
<I/σ(I)> | 16.3 | 49.4 | 3.2 |
Completeness [%] | 98.4 | 97.9 | 98.5 |
Redundancy | 6.3 | 5.8 | 6.3 |
CC(1/2) | 0.996 | 0.999 | 0.713 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | 20% PEG6000 , 10% ethylene glycol , 0.1M MES pH 6.0 , 0.1M calcium chloride |