5CBS
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with the antagonist (R)-2-amino-3-(3'-hydroxybiphenyl-3-yl)propanoic acid at 1.8A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-3 |
Synchrotron site | MAX II |
Beamline | I911-3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.468, 92.202, 197.476 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.345 - 1.801 |
R-factor | 0.1695 |
Rwork | 0.167 |
R-free | 0.21910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n0t |
RMSD bond length | 0.006 |
RMSD bond angle | 1.005 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.9) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 197.476 | 29.547 | 1.900 |
High resolution limit [Å] | 1.801 | 5.690 | 1.800 |
Rmerge | 0.029 | 0.265 | |
Rmeas | 0.084 | ||
Rpim | 0.039 | 0.015 | 0.198 |
Total number of observations | 425624 | 16084 | 30238 |
Number of reflections | 96675 | ||
<I/σ(I)> | 14.8 | 29.9 | 2.7 |
Completeness [%] | 92.5 | 98.9 | 90.6 |
Redundancy | 4.4 | 4.5 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 280 | PEG2000, lithium sulfate and phosphate-citrate buffer pH 4.5 |