5C3R
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and 5-hydroxymethyluracil (5hmU)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-19 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.817, 155.775, 75.992 |
Unit cell angles | 90.00, 91.65, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.350 |
R-factor | 0.1826 |
Rwork | 0.180 |
R-free | 0.22450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c3o |
RMSD bond length | 0.005 |
RMSD bond angle | 0.989 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.430 |
High resolution limit [Å] | 2.350 | 5.060 | 2.350 |
Rmerge | 0.069 | 0.058 | 0.126 |
Rmeas | 0.083 | 0.070 | 0.152 |
Rpim | 0.046 | 0.039 | 0.084 |
Total number of observations | 166072 | ||
Number of reflections | 53781 | ||
<I/σ(I)> | 15.3 | 10.2 | |
Completeness [%] | 98.3 | 95.9 | 99.4 |
Redundancy | 3.1 | 3 | 3.1 |
CC(1/2) | 0.991 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 289 | 0.1 M BIS-TRIS, 25%(W/v) PEG 3350 |