5BO7
Structure of human sialyltransferase ST8SiaIII in complex with CTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-29 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.97947 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 71.335, 96.497, 124.655 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.940 - 1.850 |
R-factor | 0.1715 |
Rwork | 0.170 |
R-free | 0.20020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bo8 |
RMSD bond length | 0.020 |
RMSD bond angle | 1.988 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.17) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.940 | 46.940 | 1.890 |
High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
Rmerge | 0.044 | 0.018 | 0.664 |
Rpim | 0.021 | 0.009 | 0.398 |
Total number of observations | 349276 | 2964 | 13784 |
Number of reflections | 70613 | ||
<I/σ(I)> | 21.7 | 78.6 | 2.1 |
Completeness [%] | 95.8 | 88.8 | 86.9 |
Redundancy | 4.9 | 4.7 | 3.5 |
CC(1/2) | 1.000 | 0.999 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 293 | 0.2 M (NH4)3PO4, 50 mM PIPES, 18-22% PEG2000 |