5AXP
Crystal structure of the catalytic domain of PDE10A complexed with 1-(2-fluoro-4-(2-oxo-1,3-oxazolidin-3-yl)phenyl)-5-methoxy-3-(1-phenyl-1H-pyrazol-5-yl)pyridazin-4(1H)-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97645 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.753, 81.849, 159.684 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.950 |
R-factor | 0.1785 |
Rwork | 0.176 |
R-free | 0.23350 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.210 |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (refmac_5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.077 | 0.050 | 0.549 |
Rmeas | 0.084 | 0.055 | 0.632 |
Rpim | 0.032 | 0.022 | 0.300 |
Total number of observations | 296940 | ||
Number of reflections | 45993 | ||
<I/σ(I)> | 13.2 | ||
Completeness [%] | 95.0 | 99.8 | 58.6 |
Redundancy | 6.5 | 6.4 | 3 |
CC(1/2) | 0.997 | 0.750 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 277 | 100 mM HEPES pH 8.0, 100 mM mM magnesium chloride hexahydrate, 25.7% PEG 3350 |