4ZVT
Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to VEID inhibitor.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-06-04 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 88.370, 88.370, 186.491 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.251 - 2.850 |
R-factor | 0.2012 |
Rwork | 0.200 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3edr |
Data reduction software | MOSFLM (7.0.9) |
Data scaling software | SCALA (0.1.27) |
Phasing software | PHASER (2.5.1) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.160 | 59.160 | 3.000 |
High resolution limit [Å] | 2.850 | 9.010 | 2.850 |
Rmerge | 0.122 | 0.042 | 0.696 |
Rpim | 0.058 | 0.018 | 0.338 |
Total number of observations | 103000 | 4515 | 12858 |
Number of reflections | 20141 | ||
<I/σ(I)> | 8.9 | 21.1 | 1.9 |
Completeness [%] | 98.8 | 99.6 | 98 |
Redundancy | 5.1 | 6.2 | 4.5 |
CC(1/2) | 0.993 | 0.995 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 277.15 | 300 mM Diammonium Hydrogen Citrate, 14% PEG 3350, 10 mM Guanidinium Chloride, 10 mM Dithiotheritol |