4ZVS
Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to DEVD inhibitor.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-24 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.078 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 88.105, 88.105, 187.190 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.302 - 2.500 |
R-factor | 0.2073 |
Rwork | 0.206 |
R-free | 0.23910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3edr |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.5.1) |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.113 | 0.049 | 0.847 |
Rmeas | 0.131 | 0.056 | 0.979 |
Rpim | 0.065 | 0.028 | 0.488 |
Total number of observations | 226896 | ||
Number of reflections | 29874 | ||
<I/σ(I)> | 6 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 4 | 4 | 4 |
CC(1/2) | 0.996 | 0.714 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 277.15 | 300 mM Diammonium Hydrogren Citrate, 14% PEG 3350, 10 mM Guanidinium Chloride, 10 mM Dithiotheritol |