4ZVP
Caspase-7 Variant 2 (V2) with reprogrammed substrate specificity due to Y230V/W232M/Q276C substitutions bound to DEVD inhibitor.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-29 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97919 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 86.790, 86.790, 187.571 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 69.769 - 2.500 |
R-factor | 0.1693 |
Rwork | 0.167 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3edr |
RMSD bond length | 0.007 |
RMSD bond angle | 1.130 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (7.1.1) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.9-169) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 93.790 | 93.790 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.053 | 0.516 | |
Rpim | 0.058 | 0.022 | 0.212 |
Total number of observations | 217941 | 4621 | 24254 |
Number of reflections | 29117 | ||
<I/σ(I)> | 8.4 | 13.7 | 3.3 |
Completeness [%] | 100.0 | 98.3 | 100 |
Redundancy | 7.5 | 6.5 | 7.5 |
CC(1/2) | 0.991 | 0.997 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 277 | 300 mM diammonium citrate, 14% PEG 3350, 10 mM GuHCl, 20% glycerol |