4ZUL
Structure ALDH7A1 complexed with alpha-aminoadipate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 154.430, 162.534, 158.678 |
Unit cell angles | 90.00, 95.04, 90.00 |
Refinement procedure
Resolution | 41.789 - 1.760 |
R-factor | 0.1699 |
Rwork | 0.168 |
R-free | 0.20570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j6l |
RMSD bond length | 0.006 |
RMSD bond angle | 1.000 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.17) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.860 | 47.860 | 1.790 |
High resolution limit [Å] | 1.760 | 9.640 | 1.760 |
Rmerge | 0.066 | 0.021 | 0.657 |
Rpim | 0.040 | 0.013 | 0.404 |
Total number of observations | 1405606 | 7992 | 68052 |
Number of reflections | 381768 | ||
<I/σ(I)> | 12.3 | 33.1 | 1.9 |
Completeness [%] | 99.4 | 94.3 | 99.8 |
Redundancy | 3.7 | 3.5 | 3.6 |
CC(1/2) | 0.998 | 0.999 | 0.682 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | The reservoir contained 0.1 M MgCl2, 0.1 M sodium acetate trihydrate, 0.1 M Tris-HCl pH 8.0, and 20% w/v PEG 4000. The protein stock solution contained 3 mg/mL ALDH7A1 and 50 millimolar alpha-aminoadipate. |