4Z8N
Crystal structure of the erythrocyte-binding domain from Plasmodium vivax reticulocyte-binding protein 2a (PvRBP2a)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.790, 93.450, 126.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.840 - 2.124 |
R-factor | 0.2038 |
Rwork | 0.203 |
R-free | 0.22940 |
Structure solution method | SIRAS |
RMSD bond length | 0.004 |
RMSD bond angle | 0.712 |
Data reduction software | MOSFLM (7.0.9) |
Data scaling software | Aimless (0.2.7) |
Phasing software | PHENIX (1.9-1692) |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.760 | 49.760 | 2.190 |
High resolution limit [Å] | 2.120 | 9.010 | 2.120 |
Rmerge | 0.134 | 0.047 | 1.916 |
Rpim | 0.037 | 0.013 | 0.525 |
Total number of observations | 573213 | 7847 | 45977 |
Number of reflections | 40211 | ||
<I/σ(I)> | 13.3 | 38.8 | 1.8 |
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 14.3 | 12.6 | 14.1 |
CC(1/2) | 0.999 | 0.999 | 0.538 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 25% w/v PEG3350, 100 mM HEPES sodium |